FISH Probe List

All assay types for the probes are Qual.

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Gene Chromosome Test Category Tumor Type/Subtype Code Validated Specimen Types
ALK 2p23 translocation Lung, other tumor types ialk Solid Tissue - Paraffin-Embedded Formalin-Fixed
BCL2 18q21 translocation Lymphoma ibcl2 Solid Tissue - Paraffin-Embedded Formalin-Fixed
BCL6 3q27 translocation Lymphoma ibcl6 Solid Tissue - Paraffin-Embedded Formalin-Fixed
CCND1 11q13 translocation Lymphoma iccnd1 Solid Tissue - Paraffin-Embedded Formalin-Fixed
CHOP/DDIT3 12q13 translocation Sarcomas, Liposarcoma ilipo Solid Tissue - Paraffin-Embedded Formalin-Fixed
C-met 7q31 amplification Lung, other solid tumors icmet Solid Tissue - Paraffin-Embedded Formalin-Fixed
EGFR 7p12 amplification Glioma, Lung, Other solid tumor types iegframp Solid Tissue - Paraffin-Embedded Formalin-Fixed
ETV6 12p13 translocation Mammary Analogue Secretory Salivary Gland Carcinoma iETV Solid Tissue - Paraffin-Embedded Formalin-Fixed
EWS 22q12 translocation Sarcoma, Ewings Sarcoma iews Solid Tissue - Paraffin-Embedded Formalin-Fixed
FGFR1 8p12 amplification fibroblast growth factor receptors iFGFR Solid Tissue - Paraffin-Embedded Formalin-Fixed
FKHR 13q14 translocation Sarcomas, Alveolar Rhabdomyosarcoma irhabdo Solid Tissue - Paraffin-Embedded Formalin-Fixed
FUS 16p11 translocation Sarcoma, Liposarcoma ifus Solid Tissue - Paraffin-Embedded Formalin-Fixed
HER2/neu/ERBB2 17q11 amplification Breast Cancer, other solid tumors iher2 Solid Tissue - Paraffin-Embedded Formalin-Fixed
HMGA2 12q14 translocation Salivary Gland Carcinoma ihmga2 Solid Tissue - Paraffin-Embedded Formalin-Fixed
IGH 14q32.3 translocation Lymphoma iigh Solid Tissue - Paraffin-Embedded Formalin-Fixed
IGH/MYC 14q32.3/8q24 fusion Lymphoma iighmyc Solid Tissue - Paraffin-Embedded Formalin-Fixed
MAML2 11q21 translocation Mucoepidermoid carcinoma imaml2 Solid Tissue - Paraffin-Embedded Formalin-Fixed
MALT1 18q21 translocation Lymphoma iMALt1 Solid Tissue - Paraffin-Embedded Formalin-Fixed
MDM2 12q14 amplification Liposarcoma, Lipoma, fibromatosis imdm2 Solid Tissue - Paraffin-Embedded Formalin-Fixed
MYB/NFIB 6q22-24/9p24.1 fusion Head/Neck iMYB Solid Tissue - Paraffin-Embedded Formalin-Fixed
MYC 8q24 translocation Lymphoma imyc Solid Tissue - Paraffin-Embedded Formalin-Fixed
NUT 15q14 translocation Midline Carcinoma, thymic carcinomas inut Solid Tissue - Paraffin-Embedded Formalin-Fixed
NF2 22q12.2 deletion Mesothelioma iNF2 Solid Tissue - Paraffin-Embedded Formalin-Fixed
PIK3CA 3q26.32 amplification Lung iPIK3CA Solid Tissue - Paraffin-Embedded Formalin-Fixed
PLAG1 8q12.1 translocation Salivary Gland Carcinoma iPLAG1 Solid Tissue - Paraffin-Embedded Formalin-Fixed
PTEN 10q23 deletion Salivary Duct Carcinoma iPTEN Solid Tissue - Paraffin-Embedded Formalin-Fixed
p16/CDKN2A 9p21 deletion Mesothelioma, gliomas ip16 (lung) i9p21 (neuro) Solid Tissue - Paraffin-Embedded Formalin-Fixed
RET(Lung) 10q11.2 translocation Lung iKRET Solid Tissue - Paraffin-Embedded Formalin-Fixed
RET/KIF5B 10q11.2/10p11.2 fusion Lung   Solid Tissue - Paraffin-Embedded Formalin-Fixed
ROS1 6q22.1 translocation Lung iROS1 Solid Tissue - Paraffin-Embedded Formalin-Fixed
SOX2 3q26.3-q27 amplification Squamous cell carcinoma iSOX Solid Tissue - Paraffin-Embedded Formalin-Fixed
SYT/SS18 18q11.2 translocation Sarcomas, Synovial Sarcoma isyt Solid Tissue - Paraffin-Embedded Formalin-Fixed
TFE3 Xp11.22 rearrangement transcription factor binding to IGHM enhancer 3 iTFE3 Solid Tissue - Paraffin-Embedded Formalin-Fixed
Urovysion 3,7,17, p16 chromosome gain Bladder Cancer iuro Urine
USP6 17p13 translocation Nodular fasciitis iUSP6 Solid Tissue - Paraffin-Embedded Formalin-Fixed
XY X and Y Sex chromosome analysis Sex mismatched transplant cases iXY Solid Tissue - Paraffin-Embedded Formalin-Fixed
1p36 1p deletion Glioma 1p Solid Tissue - Paraffin-Embedded Formalin-Fixed
19q13 19q deletion Glioma 19q Solid Tissue - Paraffin-Embedded Formalin-Fixed

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