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Division of Molecular Genomic Pathology- Diagnostic Services



Personalized Cancer Mutation Panel (PCMP) by Next Generation Sequencing

PCMP Test Details
PCMP List of Mutations

Brain Tumors

Glioma Panel (deletion of 1p, 19q, p16, PTEN, TP53)
MGMT promoter methylation
IDH1 and IDH2 mutations

Colorectal Cancer

Microsatellite Instability (MSI) analysis
KRAS codons 12, 13, and 61 mutations
BRAF mutation

Lung Cancer

EGFR exons 18, 19, 20, and 21 mutation
KRAS mutation

Thyroid Cancer

Thyroid Panel: BRAF, NRAS, HRAS, KRAS, RET/PTC, PAX8/PPAR γ; mutations (for freshly collected FNA samples and frozen tissue)
Thyroid Panel: BRAF, NRAS, HRAS, and KRAS mutations by PCR and RET/PTC by FISH (for fixed FNA samples and FFPE tissue)
BRAF mutation
Thyroid LOH analysis, follicular cancer

Melanoma

BRAF and NRAS Mutations

Other Tests

Parathyroid Panel, LOH analysis
Pancreatic Panel, LOH analysis & KRAS mutation
Liver Panel, LOH analysis
Appendicial Panel, LOH analysis & KRAS mutation
Double primary testing for tumor de novo vs. metastasis
Tissue identity testing

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